Query (optional)   in Class  

GrainGenes Marker Report: Xbarc20

[Submit comment/correction]

Locus
Xbarc20
Type
Microsatellite
Chromosome
7B
Map
Ta-NxW-4B31.5
Wheat, Avalon x Cadenza 4B112.5
Wheat, UC1110 x PI610750 4B35.3
Wheat-Composite2004-7B115
[ Show Nearby Loci ]
Map Data
Wheat, Avalon x Cadenza
Wheat, Composite, 2004
Wheat, Nanda2419 x Wangshuibai
Wheat, UC1110 x PI610750
Probe
BARC20
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xbarc20-4B
Xbarc20-7B
barc20
barc20-4B
barc20-7B



Probe for Locus
BARC20
Locus
[ Hide all but 1 of 6 ]
Xbarc20
Xbarc20-7B
Xbarc20-4B
barc20
barc20-4B
barc20-7B
General Remarks
Contains motif : (TAA)21
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GCGATCCACACTTTGCCTCTTTTACA 3'
5' GCGATGTCGGTTTTCAGCCTTTT 3'
Amplification Conditions
Annealing temperature = 53
Sequence
BV211638
Source Species
Triticum aestivum