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GrainGenes Marker Report: WG530

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Locus	WG530
Type	RFLP
Synonym	Synonym WG530
Chromosome	5H
Chromosome Arm	5HL
Map	[ Hide all but 1 of 21 ] Barley-Consensus-5H 2.5 Barley-Consensus2-5H 60.7 Barley-ConsensusFHB-5H 65.49 Hordeum-Bins-5H 68 Hordeum-Consensus2005-SNP-5H 56.675 Hordeum-Consensus2006-DArT-5H 51.6 Hordeum-Consensus2007-SSR-5H 51.63 Hordeum-CxS-5H 50.04 Hordeum-GxH-5H 108.48 Hordeum-NABGMP1-5H 60.8 Hordeum-OPA-2009-5H 95.11 Hordeum-PilotOPA1-5H 53.5 Hordeum-QTLConsensus-Abiotic-5H 56.67 Hordeum-QTLConsensus-Agronomic-5H 56.67 Hordeum-StMo-SNP-5H 54.79 Hordeum-SxM-base-5H 62.2 Hordeum-SxM-FeedQTL-5H 60.8 Hordeum-SxM-SSAP-5H 60.5 Hv-Consensus2006-Marcel-5H 51.63 Hv-Integrated2009-5H 53.9 Tt-Gill-5D 367.1
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 22 ]
Species	Hordeum vulgare
Probe	WG530
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of WG530 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	CSU001wg530-2 Xcnl.WG530
Probe	WG530
Locus	WG530 [ Show all 10 ]
External Databases	DDBJ EMBL GenBank
Type	Genomic STS
PCR primers	GAG ACC AAA GAT TCA ACA GC CAA TGC TCC AAA TCT CAC CA
Sequence	WG530 WG530-5
Linkage Group	[b 7LS]
Insert Enzyme	PstI
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring
Insert Size	1