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GrainGenes Marker Report: Tef1

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Gene	tef1
Gene Product	translation elongation factor 1-alpha translation elongation factor 1a translation elongation factor alpha 1
Sequence	AF231218 [ Show all 14 ]
Locus	Tef1
Type	RFLP
Synonym	Synonym Tef1 (Hordeum)
Chromosome	6H
Map	Barley-ConsensusFHB-6H 98.5 [ Show all 14 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 14 ] Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, OWB Barley, OWB, 2004 Barley, OWB, SNP Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP
Species	Hordeum vulgare
Probe	KFP202
Associated Gene	Tef1 (Hordeum)
Gene Class	Protein synthesis elongation factor
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Probe for Locus	KFP202
Locus	Tef1 Tef4 Tef2 Tef3
Reference	Nielsen PS et al. (1997) Barley elongation factor 1 alpha: genomic organization, DNA sequence, and phylogenetic implications Genome 40:559-565.
Type	cDNA
Source Species	Hordeum vulgare
Insert Size	1.63