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GrainGenes Marker Report: Q

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Gene	q
Synonym	Correct name Q (Triticum)
Gene Product	Q protein
Comment	q is an allele in T.dicoccoides Sequences in this gene record are from EST sequence annotations only
Sequence	DQ290774 [ Show all 292 ]
Locus	Q
Type	Gene
Synonym	Other name fcp650(Q) fcp650(Q)-5A
Chromosome	5A
Chromosome Arm	5AL
Map	5A, DS 5AEurope 132.1 5AL, CS x CS-TDIC DS5A 18.7 5AL, q deletions 95 Ta-Kyoto-5A 170 Triticum-Genes-5A 18.3
	[ Show Nearby Loci ]
Breakpoint Interval	5AL7-0.87-0.87 5AL-q2/0
Map Data	5A, DS 5AEurope 5AL, CS q deletions, physical 5AL, CS x CS-TDIC DS5A Wheat genes Wheat, Kyoto
2 Point Data	Centromere/q#1 [ Show all 8 ]
Probe	FCP650 Faris JD et al. (2014) Analysis of agronomic and domestication traits in a durum x cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map. Theoretical and Applied Genetics 127:2333-2348.
Associated Gene	Q (Triticum)
Gene Class	APETALA2-like Spelt
Reference	Rao MVP (1983) Telocentric mapping of the squarehead (vulgare) gene Q on chromosome 5A of hexaploid wheat. Wheat Information Service 56:12-13.
Possible Orthologs	[ Hide all but 1 of 26 ] fcp650(Q) fcp650(Q)-5A TraesCS1A02G058400 TraesCS2A02G514200 TraesCS5A02G473800 TraesCS7A02G744600LC TraesCS1B02G076300 TraesCS2B02G542400 TraesCS5B02G486900 TraesCS7B02G440400 TraesCS1D02G059200 TraesCS2D02G515800 TraesCS5D02G486600 TraesCS7D02G512600 HORVU1Hr1G011800 HORVU2Hr1G113880 HORVU5Hr1G112440 HORVU7Hr1G116220 Bradi2g37800 Bradi5g24100 Bradi1g03880 Bradi1g30337 Os05g03040 OsSHAT1 OsIDS1 Os06g43220
Probe for Locus	FCP650
Locus	fcp650(Q) fcp650(Q)-5A Q
Reference	Faris JD et al. (2014) Analysis of agronomic and domestication traits in a durum x cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map. Theoretical and Applied Genetics 127:2333-2348.
General Remarks	Annealing temperature 65 C
Type	PCR
PCR primers	5' GCACTAGCTAATTCAGTGGTTAGATTTGCTCA 3' 5' ATTCAGTGGTAGCAACAGTTTCAGTAAGCTGG 3' 5 GCACTAGCTAATTCAGTGGTTAGATTTGCT CA 3 5 ATTCAGTGGTAGCAACAGTTTCAGTAAGCT GG 3
Source Gene	Q (Triticum)
Source Allele	q (Triticum) Q (Triticum)