GrainGenes Marker Report: Plc
Gene
Plc
Candidate Locus
Xpsr160
Locus Candidate for Gene
Xpsr160
Type
RFLP
Chromosome
6R 7D
Chromosome Arm
6RS 7DS
Map
Oat-2013-SxW-RGA_AswAC 14 Rye-2009-Consensus-6R 63.1 Secale-PxP-6 0 Secale-PxP-update-6R 0 Ta-Physical-Gill-7ABD -95
[ Show Nearby Loci ]
Breakpoint Interval
7S-0.89-1.00
Map Data
Oat-2013-SxW-RGA Rye, P87 x P105 Rye, P87 x P105, update Rye_2009_consensus Wheat, Physical
Species
Triticum aestivum
Probe
PSR160
Candidate Gene
Plc
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
[ Hide all but 1 of 17 ] PSR160 psr160a psr160b Xpsr160(Plc) Xpsr160-4A Xpsr160-4B Xpsr160-4D Xpsr160-6R Xpsr160-7A Xpsr160-7D Xpsr160.1 Xpsr160.1(Plc)-4A Xpsr160.2 Xpsr160.2-7D Xpsr160a PSR160B PSR160A
Locus
Plc
Type
Gene RFLP
Synonym
Synonym Plc (Avena)
Chromosome
7H
Chromosome Arm
7HS
Map
Barley-Consensus-7H -68.4
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 14 ]
Probe
pKG4438 PSR160
Associated Gene
Plc (Avena)
Gene Class
Plumule color
Reference
Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xpsr160(Plc)-4A Xpsr160(Plc)-7A Xpsr160(Plc)-7D
Probe for Locus
pKG4438
Locus
Plc
Synonym
Other name KFP038A Synonym HAR35_30989
Reference
Nielsen PS and Gausing K (1987) The precursor of barley plastocyanin sequence of complementary DNA clones and gene expression in different tissues FEBS Letters 225:159-162.
Type
cDNA
Sequence
Y00704
Linkage Group
Barley 1 (7H)
Source Gene Class
Plastocyanin
Source Gene
PetE (Hordeum) plastocyanin
Source Species
Hordeum vulgare
Insert Size
0.522 0.6
GrainGenes Marker Report: Plc
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