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GrainGenes Marker Report: PSR167B

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Locus
PSR167B
Type
RFLP
Synonym
SynonymPSR167
Chromosome
6H
Map
Barley-Consensus2-6H55.9
[ Show all 8 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 10 ]
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, Marcel
Barley, Integrated, Marcel 2009
Barley, Steptoe x Morex, SNP
Barley, SxM
Barley, SxM, Feed QTLs
Probe
PSR167
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
PSR167
[ Show all 20 ]



Probe for Locus
PSR167
Locus
Xpsr167
[ Show all 22 ]
Synonym
SynonymHAR35_809
HAR35_810
HAR35_811
General Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR167
Copy Number
2
Background
1
Cross hybridizes to
Secale cerealegood
Hordeum vulgarefair
Polymorphism
PSR167 H HindIII41.0 (3, 13)
[ Show all 8 ]
Gel
PSR167 Gale
Linkage Group
6AS
[ Show all 8 ]
Insert Enzyme
SmaI
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
0.85