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GrainGenes Marker Report: PSR162

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Locus	PSR162
Type	RFLP
Synonym	Other name psr162
Chromosome	1H
Map	1D.1R recombinants -39.3 [ Show all 9 ]
	[ Show Nearby Loci ]
Rearrangement	In segment RL-1 Not in segment 82-180 WR-4 WR-5 R1
Map Data	Barley, Consensus 2006, DArT [ Show all 9 ]
2 Point Data	OG09-400/PSR162 Distance: 22 cM PSR162/OG04-600 Distance: 3 cM
Species	Avena sativa
Probe	PSR162
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark	Number of populations contributing to the placement of PSR162 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs	[ Hide all but 1 of 11 ] PSR162a PSR162b Xpsr162 Xpsr162-1 Xpsr162-1A Xpsr162-1B Xpsr162-1D Xpsr162-1R Xpsr162-1U psr162 psr162-1B
Probe	PSR162
Locus	PSR162 [ Show all 13 ]
Synonym	Synonym HAR35_16343
Remarks	Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type	cDNA
Sequence	PSR162 Forward PSR162 Reverse
Copy Number	1
Background	0
Cross hybridizes to	Secale cereale good Hordeum vulgare good
Polymorphism	PSR162 H EcoRI 55.6 (2, 10) [ Show all 17 ]
Gel	PSR162 Gale
Linkage Group	1AL [ Show all 6 ]
Insert Enzyme	SmaI
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring
Source Tissue	Leaf
Insert Size	1.8