GrainGenes Marker Report: PSR162
Locus
PSR162
Type
RFLP
Synonym
Other name psr162
Chromosome
1H
Map
1D.1R recombinants -39.3
[ Show all 9 ]
[ Show Nearby Loci ]
Rearrangement
In segment RL-1 Not in segment 82-180 WR-4 WR-5 R1
Map Data
[ Hide all but 1 of 9 ] Barley, Consensus 2006, DArT Barley, CxH Barley, GxH Barley, VGxA Oat, OxT Oat-2016-Consensus Oat-2016-OxT Oat-2018-Consensus Wheat.Rye recombinant
2 Point Data
OG09-400/PSR162 Distance: 22 cM PSR162/OG04-600 Distance: 3 cM
Species
Avena sativa
Probe
PSR162
Reference
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of PSR162 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs
PSR162a
[ Show all 11 ]
Probe
PSR162
Locus
PSR162
[ Show all 13 ]
Synonym
Synonym HAR35_16343
Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR162 Forward PSR162 Reverse
Copy Number
1
Background
0
Cross hybridizes to
Secale cereale good Hordeum vulgare good
Polymorphism
PSR162 H EcoRI 55.6 (2, 10)
[ Show all 17 ]
Gel
PSR162 Gale
Linkage Group
1AL
[ Show all 6 ]
Insert Enzyme
SmaI
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
1.8
GrainGenes Marker Report: PSR162
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