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GrainGenes Marker Report: PSR154

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Locus	PSR154
Type	RFLP
Synonym	Synonym PSR154
Chromosome	6H
Chromosome Arm	6HL
Map	Barley-consensus-2003-6H 90.9 [ Show all 15 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QAa.StMo-6H
Map Data	[ Hide all but 1 of 17 ] Barley consensus Barley consensus 2 Barley consensus 2003 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, CxS Barley, GxH Barley, Integrated, Marcel 2009 Barley, Steptoe x Morex, SNP Barley, SxM Barley, SxM, Feed QTLs Barley, VGxA T.tauschii
2 Point Data	PSR154/OF18-340 Distance: 9 cM Xris25a/PSR154 Distance: 11 cM
Probe	PSR154
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Langridge, Peter J.
Remark	Number of populations contributing to the placement of PSR154 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	psr154a [ Show all 11 ]
Probe	PSR154
Locus	Xpsr154 [ Show all 12 ]
Related Probe	PSR134 PSR175
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Type	cDNA
Sequence	PSR154
Copy Number	1
Background	0
Cross hybridizes to	Secale cereale good Hordeum vulgare good
Gel	PSR154 Gale
Linkage Group	6AL [ Show all 7 ]
Insert Enzyme	SmaI
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring
Source Tissue	Leaf
Insert Size	0.4