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GrainGenes Marker Report: PSR144

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Locus
psr144
Type
RFLP
Map
Oat-2002-OxT-QTL_12
Oat-OxT-12
[ Show Nearby Loci ]
Map Data
Oat, OxT
Oat-2002-OxT-QTL
Probe
PSR144
Possible Orthologs
Xpsr144
[ Show all 7 ]



Probe
PSR144
Locus
Xpsr144-4A
[ Show all 11 ]
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR144 Forward
PSR144 Reverse
Copy Number
1
Background
0
Cross hybridizes to
Secale cerealegood
Hordeum vulgaregood
Polymorphism
[ Hide all but 1 of 17 ]
PSR144 H EcoRI20.0 (2, 10)
PSR144 H EcoRV16.7 (2, 12)
PSR144 H DraI0.0 (1, 4)
PSR144 H HindIII22.2 (2, 9)
PSR144 4D DraI4D 15.4 (2, 13)
PSR144 4A DraI4A 0.0 (1, 13)
PSR144 4B DraI4B 0.0 (1, 13)
PSR144 4A EcoRV4A 0.0 (1, 13)
PSR144 4D EcoRV4D 0.0 (1, 13)
PSR144 4B EcoRV4B 0.0 (1, 13)
PSR144 4D HindIII4D 0.0 (1, 14)
PSR144 4B HindIII4B 47.6 (2, 15)
PSR144 4A HindIII4A 0.0 (1, 15)
PSR144 4D EcoRI4D 0.0 (1, 12)
PSR144 4B EcoRI4B 0.0 (1, 12)
PSR144 4A EcoRI4A 0.0 (1, 12)
PSR144 R HindIII
Gel
PSR144 Gale
Linkage Group
4AL
[ Show all 6 ]
Insert Enzyme
SmaI
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
1.2