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GrainGenes Marker Report: POPA3_1534

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Locus	POPA3_1534
Type	SNP
Chromosome	2H
Chromosome Arm	2HS
Map	Barley-Core-2014_2H 21.67 Hordeum-OPA-2009-2H 16.77 Hordeum-OPA123-2008-2H 16.77 Hordeum-OPAConsensus-2011-2H 13.43
	[ Show Nearby Loci ]
QTL with Locus Marker	MQTL_Du2024.yield-2H.4
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_907
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 3_1534 Most representative HarvEST:Barley Assembly #32 Unigene = 364 Most representative HarvEST:Barley Assembly #35 Unigene = 907 HarvEST Unigene 35 Probe Set = Contig565_at Unigene 35 Rice Locus = LOC_Os05g22970 Description for best rice BLAST hit to Unigene 35 member = lactoylglutathione lyase, putative, expressed; E value = 1E-105 Marker name in barley Pilot OPA3 = 3_1534 Original SNP name = U35_907_755 Description for best rice BLAST hit to Unigene 35 member = protein lactoylglutathione lyase, putative, expressed; E value = 1E-105 BLAST hit in the rice genome = lactoylglutathione lyase, putative, expressed
Probe for Locus	HAR35_907
Locus	POPA3_1534
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare