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GrainGenes Marker Report: POPA3_1419

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Locus
POPA3_1419
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_419
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_1419
Most representative HarvEST:Barley Assembly #32 Unigene = 1478
Most representative HarvEST:Barley Assembly #35 Unigene = 419
HarvEST Unigene 35 Probe Set = ChlorContig11_s_at; ChlorContig11_x_at; Contig3364_at; HVSMEc0001D14f_x_at; HVSMEc0004C11f_x_at; HVSMEc0005O17f_x_at; HVSMEc0009K16f_s_at; HVSMEc0011H17f_x_at; MitoContig11_at
Unigene 35 Rice Locus = LOC_Os10g21190
Description for best rice BLAST hit to Unigene 35 member = hypothetical protein; E value = 6E-32
BLAST hit in the rice genome = hypothetical protein



Probe for Locus
HAR35_419
Locus
POPA3_1419