Query (optional)   in Class  

GrainGenes Marker Report: POPA3_1330

[Submit comment/correction]

Locus
POPA3_1330
Type
SNP
Chromosome
2H
Map
Barley-Core-2014_2H176.56
Hordeum-OPAConsensus-2011-2H170.33
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_22781
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_1330
Most representative HarvEST:Barley Assembly #32 Unigene = 15410
Most representative HarvEST:Barley Assembly #35 Unigene = 22781
HarvEST Unigene 35 Probe Set = Contig17366_at
Unigene 35 Rice Locus = LOC_Os07g35540
Description for best rice BLAST hit to Unigene 35 member = protein kinase, putative, expressed; E value = 7E-33
BLAST hit in the rice genome = protein kinase, putative, expressed



Probe for Locus
HAR35_22781
Locus
POPA3_1330