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GrainGenes Marker Report: POPA3_0946

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Locus
POPA3_0946
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_2228
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0946
Most representative HarvEST:Barley Assembly #32 Unigene = 4169
Most representative HarvEST:Barley Assembly #35 Unigene = 2228
HarvEST Unigene 35 Probe Set = Contig5966_at; S0001100160A01F1_at
Unigene 35 Rice Locus = LOC_Os05g01450
Description for best rice BLAST hit to Unigene 35 member = eukaryotic translation initiation factor 3 subunit 5, putative, expressed; E value = 1E-141
BLAST hit in the rice genome = eukaryotic translation initiation factor 3 subunit 5, putative, expressed



Probe for Locus
HAR35_2228
Locus
POPA1_0613
POPA3_0946