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GrainGenes Marker Report: POPA3_0597

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Locus	POPA3_0597
Type	SNP
Synonym	Other name 12_30597 BOPA2_12_30597 Synonym 12_30597
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_2828 i_12_30597
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_0597 Marker name in barley OPA1 = 12_30597 Original SNP name = U32_5407_1165 Most representative HarvEST:Barley Assembly #32 Unigene = 5407 Most representative HarvEST:Barley Assembly #35 Unigene = 2828 HarvEST Unigene 35 Probe Set = Contig7379_at Unigene 35 Rice Locus = LOC_Os11g16410 Description for best rice BLAST hit to Unigene 35 member = dehydrogenase/reductase SDR family member 7 precursor, putative, expressed; E value = 1E-159 BLAST hit in the rice genome = dehydrogenase/reductase SDR family member 7 precursor, putative, expressed
Probe for Locus	HAR35_2828
Locus	POPA3_0597