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GrainGenes Marker Report: POPA3_0299

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Locus
POPA3_0299
Type
SNP
Synonym
Other name12_30299
BOPA2_12_30299
Synonym12_30299
Map Data
Barley, OPA 2009, Consensus
Species
Hordeum vulgare
Probe
HAR35_20207
i_12_30299
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 8 ]
Marker name in barley Pilot OPA1 = 3_0299
Marker name in barley OPA1 = 12_30299
Original SNP name = ConsensusGBS0265_2
Most representative HarvEST:Barley Assembly #32 Unigene = 20705
Most representative HarvEST:Barley Assembly #35 Unigene = 20207
HarvEST Unigene 35 Probe Set =
Unigene 35 Rice Locus = LOC_Os11g38900
BLAST hit in the rice genome = histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed



Probe for Locus
HAR35_20207
Locus
POPA3_0299