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GrainGenes Marker Report: POPA3_0147

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Locus	POPA3_0147
Type	SNP
Synonym	Other name 12_30147 BOPA2_12_30147 Synonym 12_30147
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_18800 i_12_30147
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_0147 Marker name in barley OPA1 = 12_30147 Original SNP name = ABC10477_1_295 Most representative HarvEST:Barley Assembly #32 Unigene = 8047 Most representative HarvEST:Barley Assembly #35 Unigene = 18800 HarvEST Unigene 35 Probe Set = Contig10477_at Unigene 35 Rice Locus = LOC_Os05g41610 Description for best rice BLAST hit to Unigene 35 member = glucan endo-1,3-beta-glucosidase GVI precursor, putative, expressed; E value = 1E-154 BLAST hit in the rice genome = glucan endo-1,3-beta-glucosidase GVI precursor, putative, expressed
Probe for Locus	HAR35_18800
Locus	POPA3_0147