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GrainGenes Marker Report: POPA3_0116

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Locus
POPA3_0116
Type
SNP
Synonym
Synonym12_30116
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3271
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ]
Marker name in barley Pilot OPA1 = 3_0116
Marker name in barley OPA1 = 12_30116
Original SNP name = ABC09211_1_444
Most representative HarvEST:Barley Assembly #32 Unigene = 7171
Most representative HarvEST:Barley Assembly #35 Unigene = 3271
HarvEST Unigene 35 Probe Set = Contig9211_at; Contig9212_s_at
Unigene 35 Rice Locus = LOC_Os01g71010
Description for best rice BLAST hit to Unigene 35 member = lipase precursor, putative, expressed; E value = 1E-175
BLAST hit in the rice genome = lipase precursor, putative, expressed



Probe for Locus
HAR35_3271
Locus
POPA3_0116