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GrainGenes Marker Report: POPA2_1184

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Locus	POPA2_1184
Type	SNP
Synonym	Other name 11_21184 BOPA1_11_21184 BOPA1_6996-838 Synonym 11_21184
Chromosome	2H
Chromosome Arm	2HL
Map	Hordeum-OPAConsensus-2011-2H 124.98
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_3599 i_11_21184
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_1184 Marker name in barley OPA1 = 11_21184 Original SNP name = 6996-838 Most representative HarvEST:Barley Assembly #32 Unigene = 6996 Most representative HarvEST:Barley Assembly #35 Unigene = 3599 HarvEST Unigene 35 Probe Set = Contig9404_at Unigene 35 Rice Locus = LOC_Os04g50864 Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 8E-75 BLAST hit in the rice genome = expressed protein
Probe for Locus	HAR35_3599
Locus	POPA2_1184