GrainGenes Marker Report: POPA2_1180
Locus
POPA2_1180
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14504
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 2_1180 Most representative HarvEST:Barley Assembly #32 Unigene = 697 Most representative HarvEST:Barley Assembly #35 Unigene = 14504 HarvEST Unigene 35 Probe Set = Contig1024_at; EBed02_SQ003_C14_s_at Unigene 35 Rice Locus = LOC_Os04g28180 Description for best rice BLAST hit to Unigene 35 member = 40S ribosomal protein S8, putative, expressed; E value = 1E-112 BLAST hit in the rice genome = 40S ribosomal protein S8, putative, expressed
Probe for Locus
HAR35_14504
Locus
POPA1_0883 POPA2_1180
Synonym
Synonym CDO370
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1180
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