GrainGenes Marker Report: POPA2_0719
Locus
POPA2_0719
Type
SNP
Synonym
Other name 11_20719 BOPA1_11_20719 BOPA1_4256-833 Synonym 11_20719
Chromosome
3H
Chromosome Arm
3HS
Map
Barley, 2012 9KSNP 3H 46 Hordeum-OPA-2009-3H 48.63 Hordeum-OPA123-2008-3H 48.63 Hordeum-OPAConsensus-2011-3H 52.17
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_1198 i_11_20719
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0719 Marker name in barley OPA1 = 11_20719 Original SNP name = 4256-833 Most representative HarvEST:Barley Assembly #32 Unigene = 4256 Most representative HarvEST:Barley Assembly #35 Unigene = 1198 HarvEST Unigene 35 Probe Set = Contig5885_at Unigene 35 Rice Locus = LOC_Os01g09010 Marker name in barley Pilot OPA2 = 2_0719 Original SNP name = U32_3139_110 Description for best rice BLAST hit to Unigene 35 member = protein 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed; E value = 0 BLAST hit in the rice genome = 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed
Probe for Locus
HAR35_1198
Locus
POPA2_0719
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0719
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