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GrainGenes Marker Report: POPA2_0679

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Locus
POPA2_0679
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16839
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0679
Most representative HarvEST:Barley Assembly #32 Unigene = 4091
Most representative HarvEST:Barley Assembly #35 Unigene = 16839
HarvEST Unigene 35 Probe Set = Contig5712_at
Unigene 35 Rice Locus = LOC_Os01g01302
Description for best rice BLAST hit to Unigene 35 member = shikimate kinase family protein, expressed; E value = 1E-110
BLAST hit in the rice genome = shikimate kinase family protein, expressed



Probe for Locus
HAR35_16839
Locus
POPA1_0598
POPA2_0679