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GrainGenes Marker Report: POPA2_0221

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Locus
POPA2_0221
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_793
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0221
Most representative HarvEST:Barley Assembly #32 Unigene = 1634
Most representative HarvEST:Barley Assembly #35 Unigene = 793
HarvEST Unigene 35 Probe Set = Contig2406_at; EBro08_SQ007_B12_s_at
Unigene 35 Rice Locus = LOC_Os05g46480
Description for best rice BLAST hit to Unigene 35 member = late embryogenesis abundant protein, group 3, putative, expressed; E value = 1E-51
BLAST hit in the rice genome = late embryogenesis abundant protein, group 3, putative, expressed



Probe for Locus
HAR35_793
Locus
POPA2_0221