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GrainGenes Marker Report: POPA2_0216

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Locus	POPA2_0216
Type	SNP
Chromosome	6H
Chromosome Arm	6HL
Map	Hordeum-OPA-2009-6H 97.39 Hordeum-OPA123-2008-6H 97.39
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_936
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0216 Most representative HarvEST:Barley Assembly #32 Unigene = 1617 Most representative HarvEST:Barley Assembly #35 Unigene = 936 HarvEST Unigene 35 Probe Set = Contig2394_s_at Unigene 35 Rice Locus = LOC_Os02g54650 Description for best rice BLAST hit to Unigene 35 member = diacylglycerol kinase, putative, expressed; E value = 1E-128 Marker name in barley Pilot OPA2 = 2_0216 Original SNP name = 1617-189 Original SNP name = UCI_Dhn5_124 Description for best rice BLAST hit to Unigene 35 member = protein diacylglycerol kinase, putative, expressed; E value = 1E-128 BLAST hit in the rice genome = diacylglycerol kinase, putative, expressed
Probe for Locus	HAR35_936
Locus	POPA2_0216
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare