GrainGenes Marker Report: POPA2_0177
Locus
POPA2_0177
Type
SNP
Chromosome
1H
Map
Barley-Core-2014_1H 9.34 Hordeum-OPAConsensus-2011-1H 9.37
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_14808
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 2_0177 Most representative HarvEST:Barley Assembly #32 Unigene = 1457 Most representative HarvEST:Barley Assembly #35 Unigene = 14808 HarvEST Unigene 35 Probe Set = Contig2414_s_at; Contig2416_at Unigene 35 Rice Locus = LOC_Os05g01710 Description for best rice BLAST hit to Unigene 35 member = transcription initiation factor IIA gamma chain, putative, expressed; E value = 8E-52 BLAST hit in the rice genome = transcription initiation factor IIA gamma chain, putative, expressed
Probe for Locus
HAR35_14808
Locus
POPA2_0177
GrainGenes Marker Report: POPA2_0177
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