GrainGenes Marker Report: POPA2_0147
Locus
POPA2_0147
Type
SNP
Synonym
Synonym 11_20147
Chromosome
2H
Chromosome Arm
2HS
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14923
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0147 Marker name in barley OPA1 = 11_20147 Original SNP name = 1341-841 Most representative HarvEST:Barley Assembly #32 Unigene = 1341 Most representative HarvEST:Barley Assembly #35 Unigene = 14923 HarvEST Unigene 35 Probe Set = HV_CEa0002E17r2_s_at Unigene 35 Rice Locus = LOC_Os03g22810 Description for best rice BLAST hit to Unigene 35 member = superoxide dismutase 1, putative, expressed; E value = 1E-76 BLAST hit in the rice genome = superoxide dismutase 1, putative, expressed
Probe for Locus
HAR35_14923
Locus
POPA1_0084 POPA2_0147
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0147
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