Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: POPA2_0037

[Submit comment/correction]

Locus	POPA2_0037
Type	SNP
Synonym	Other name 12_20037 BOPA2_12_20037 Synonym 12_20037
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_5527 i_12_20037
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0037 Marker name in barley OPA1 = 12_20037 Original SNP name = 10698-545 Most representative HarvEST:Barley Assembly #32 Unigene = 10698 Most representative HarvEST:Barley Assembly #35 Unigene = 5527 HarvEST Unigene 35 Probe Set = Contig13339_at Unigene 35 Rice Locus = LOC_Os01g13150 Description for best rice BLAST hit to Unigene 35 member = metallo-beta-lactamase superfamily protein, expressed; E value = 0 BLAST hit in the rice genome = metallo-beta-lactamase superfamily protein, expressed
Probe for Locus	HAR35_5527
Locus	POPA2_0037