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GrainGenes Marker Report: POPA1_0898

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Locus	POPA1_0898
Type	SNP
Chromosome	2H
Chromosome Arm	2HS
Map	Barley-Core-2014_2H 68.8 Hordeum-OPA-2009-2H 58.24 Hordeum-OPA123-2008-2H 58.24 Hordeum-OPAConsensus-2011-2H 63.55
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_13965
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 1_0898 Most representative HarvEST:Barley Assembly #32 Unigene = 721 Most representative HarvEST:Barley Assembly #35 Unigene = 13965 HarvEST Unigene 35 Probe Set = Contig716_at; HV13D09r_at Unigene 35 Rice Locus = LOC_Os01g41120 Description for best rice BLAST hit to Unigene 35 member = protein binding protein, putative, expressed; E value = 0.0000000000003 Original SNP name = 721-102 HarvEST Unigene 35 Probe Set = Contig716_at, HV13D09r_at Description for best rice BLAST hit to Unigene 35 member = protein protein binding protein, putative, expressed; E value = 0.0000000000003 BLAST hit in the rice genome = protein binding protein, putative, expressed
Probe for Locus	HAR35_13965
Locus	POPA1_0898
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare