GrainGenes Marker Report: POPA1_0501
Locus
POPA1_0501
Type
SNP
Synonym
Synonym 11_10501
Chromosome
1H
Chromosome Arm
1HS
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_0501 Marker name in barley OPA1 = 11_10501 Original SNP name = 36-178 Most representative HarvEST:Barley Assembly #32 Unigene = 36 Most representative HarvEST:Barley Assembly #35 Unigene = 16 HarvEST Unigene 35 Probe Set = Contig943_at Unigene 35 Rice Locus = LOC_Os05g02070 Description for best rice BLAST hit to Unigene 35 member = metallothionein-like protein type 2, putative, expressed; E value = 8E-33 BLAST hit in the rice genome = metallothionein-like protein type 2, putative, expressed
Probe for Locus
HAR35_16
Locus
POPA1_0501 POPA2_0598
GrainGenes Marker Report: POPA1_0501
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