GrainGenes Marker Report: POPA1_0382
Locus
POPA1_0382
Type
SNP
Chromosome
3H
Map
Barley-Core-2014_3H 117.62 Hordeum-OPAConsensus-2011-3H 137.74
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_15874
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0382 Most representative HarvEST:Barley Assembly #32 Unigene = 2848 Most representative HarvEST:Barley Assembly #35 Unigene = 15874 HarvEST Unigene 35 Probe Set = Contig4022_at; rbaal31m19_s_at Unigene 35 Rice Locus = LOC_Os01g68480 Description for best rice BLAST hit to Unigene 35 member = thioredoxin F-type, chloroplast precursor, putative, expressed; E value = 6E-75 BLAST hit in the rice genome = thioredoxin F-type, chloroplast precursor, putative, expressed
Probe for Locus
HAR35_15874
Locus
POPA1_0382
GrainGenes Marker Report: POPA1_0382
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