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GrainGenes Marker Report: POPA1_0155

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Locus	POPA1_0155
Type	SNP
Synonym	Synonym 12_10155
Chromosome	3H
Chromosome Arm	3HO
Map	Hordeum-OPA-2009-3H 55.57 Hordeum-OPA123-2008-3H 55.57 Hordeum-OPAConsensus-2011-3H 67.86
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_828
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 1_0155 Marker name in barley OPA1 = 12_10155 Original SNP name = 1738-446 Most representative HarvEST:Barley Assembly #32 Unigene = 1738 Most representative HarvEST:Barley Assembly #35 Unigene = 828 HarvEST Unigene 35 Probe Set = Contig2568_x_at Unigene 35 Rice Locus = LOC_Os03g37120 Description for best rice BLAST hit to Unigene 35 member = ATP binding protein, putative, expressed; E value = 0.00000000007 Marker name in barley OPA2 = 12_10155 Description for best rice BLAST hit to Unigene 35 member = protein ATP binding protein, putative, expressed; E value = 0.00000000007 BLAST hit in the rice genome = ATP binding protein, putative, expressed
Probe for Locus	HAR35_828
Locus	POPA1_0155
Synonym	Synonym HvES1A
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare