GrainGenes Marker Report: POPA1_0153
Locus
POPA1_0153
Type
SNP
Synonym
Other name 11_10153 BOPA1_11_10153 BOPA1_1735-1424 Synonym 11_10153
Chromosome
7H
Chromosome Arm
7HS
Map
Barley, 2012 9KSNP 7H 65.4 Hordeum-OPA-2009-7H 73.75 Hordeum-OPA123-2008-7H 73.75 Hordeum-OPAConsensus-2011-7H 79.08
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_15071 i_11_10153
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_0153 Marker name in barley OPA1 = 11_10153 Original SNP name = 1735-1424 Most representative HarvEST:Barley Assembly #32 Unigene = 1735 Most representative HarvEST:Barley Assembly #35 Unigene = 15071 HarvEST Unigene 35 Probe Set = Contig2561_s_at Unigene 35 Rice Locus = LOC_Os06g13810 Description for best rice BLAST hit to Unigene 35 member = protein pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit, putative, expressed; E value = 0 BLAST hit in the rice genome = pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit, putative, expressed
Probe for Locus
HAR35_15071
Locus
POPA1_0153
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0153
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