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GrainGenes Marker Report: MWG938

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Locus
MWG938
Type
RFLP
Synonym
SynonymMWG938
Chromosome
1H
Chromosome Arm
1HS
Map
Barley-Consensus-1H-34.7
[ Show all 21 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 23 ]
Species
Hordeum vulgare
Probe
MWG938
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 6 ]
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 6 ]
Inadvertently misnamed MWG983 in Barley Genetics Newsletter 23:53, 1993.
Number of populations contributing to the placement of MWG938 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG938-1H
[ Show all 11 ]



Probe
MWG938
Locus
Xmwg938-1
[ Show all 12 ]
Reference
ReferenceSayed-Tabatabaei BE et al. (1998) DNA sequencing and primer designing for RFLP clones evenly distributed in the barley genome. Barley Genetics Newsletter 28:15-18.
Type
Genomic
STS
STS primers
T7 side (5' to 3') ACGTAGTTGATGCAGAACCAATAGC
T3 side (5' to 3') GTCGCCTCTCGTATCATTTCAAAAG
Sequence
BH854309
BH854310
MWG938
MWG938-5
MWG938-3
Polymorphism
MWG938 EcoRI
Insert Enzyme
PstI
Source Species
Hordeum vulgare