Query (optional)   in Class  

GrainGenes Marker Report: MWG851D

[Submit comment/correction]

Locus
MWG851D
Type
RFLP
Synonym
SynonymMWG851
Chromosome
5H
Map
[ Hide all but 1 of 8 ]
Barley-Consensus2-5H193.3
Hordeum-Bins-5H201.1
Hordeum-Consensus2005-SNP-5H191.288
Hordeum-QTLConsensus-Abiotic-5H191.29
Hordeum-QTLConsensus-Agronomic-5H191.29
Hordeum-StMo-SNP-5H181.31
Hv-Consensus2006-Marcel-5H182.39
Hv-Integrated2009-5H178
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 10 ]
Probe
MWG851
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
MWG851
[ Show all 6 ]



Probe for Locus
MWG851
Locus
MWG851b
[ Show all 8 ]
Reference
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
STS
STS primers
5' GTGCAATACCAGCAAACTCA
5' CATAGCAGAACGTCTCAAGT
STS size
301
Amplification Conditions
STS annealing temperature 58-60 oC
Sequence
AJ234592
AJ234591
MWG851-5
MWG851-3
Linkage Group
Barley 1 (7H)
Insert Enzyme
PstI
Source Species
Hordeum vulgare
Insert Size
1.6