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GrainGenes Marker Report: MWG844a

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Locus	MWG844a
Type	RFLP SNP
Synonym	Synonym MWG844
Chromosome	2H
Map	Barley-Consensus2-2H 0 [ Show all 12 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus 2 [ Show all 12 ]
Species	Hordeum vulgare
Probe	MWG844
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	[ Hide all but 1 of 7 ] MWG844 MWG844b MWG844b-3H MWG844c MWG844E Xmwg844-2A Xmwg844-4A
Probe for Locus	MWG844
Locus	MWG844a [ Show all 8 ]
Synonym	Synonym HAR35_26589 HAR35_42594 HAR35_9645
Type	Genomic STS
STS primers	5' TCAGGAACCTGGCACCAACG 5' CATCAGCCCGCGATACATCC
STS size	374
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	AJ234585 MWG844-5
Polymorphism	MWG844 EcoRI
Insert Enzyme	PstI
Source Species	Hordeum vulgare