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GrainGenes Marker Report: MWG844E

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Locus
MWG844E
Type
RFLP
Synonym
SynonymMWG844
Chromosome
2H
Map
[ Hide all but 1 of 7 ]
Hordeum-Consensus2005-SNP-2H95.765
Hordeum-OWB-2H104.9
Hordeum-OWB-SNP-2H110.01
Hordeum-QTLConsensus-Abiotic-2H95.77
Hordeum-QTLConsensus-Agronomic-2H95.77
Hv-Consensus2006-Marcel-2H96.41
Hv-Integrated2009-2H92.2
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Map Data
Barley, Abiotic QTL Consensus
[ Show all 7 ]
Probe
MWG844
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Possible Orthologs
MWG844
[ Show all 7 ]



Probe for Locus
MWG844
Locus
MWG844a
[ Show all 8 ]
Synonym
SynonymHAR35_26589
HAR35_42594
HAR35_9645
Type
Genomic
STS
STS primers
5' TCAGGAACCTGGCACCAACG
5' CATCAGCCCGCGATACATCC
STS size
374
Amplification Conditions
STS annealing temperature 58-60 oC
Sequence
AJ234585
MWG844-5
Polymorphism
MWG844 EcoRI
Insert Enzyme
PstI
Source Species
Hordeum vulgare