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GrainGenes Marker Report: MWG2018

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Locus
MWG2018
Type
RFLP
Synonym
SynonymMWG2018
Chromosome
7H
Chromosome Arm
7HS
Map
[ Hide all but 1 of 10 ]
Barley-Consensus-7H-77.5
Barley-Consensus2-7H0
Hordeum-Bins-7H3.4
Hordeum-Consensus2005-SNP-7H19.008
Hordeum-Graner2-7H4.3
Hordeum-QTLConsensus-Abiotic-7H19.01
Hordeum-QTLConsensus-Agronomic-7H19.01
Hordeum-StMo-SNP-7H4.51
Hv-Consensus2006-Marcel-7H7.72
Hv-Integrated2009-7H9.6
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 10 ]
Probe
MWG2018
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka
Possible Orthologs
Xmwg2018



Probe
MWG2018
Locus
MWG2018
Xmwg2018
Type
Genomic
STS
STS primers
5' TCGACGGCAAGCTCCTGACC
5' GCGACGGCAGTATGGTGAAGC
STS size
342
Amplification Conditions
STS annealing temperature 62-65 oC
Sequence
AJ234706
MWG2018-5
Linkage Group
Barley 1 (7H)
Insert Enzyme
PstI
Source Species
Hordeum vulgare