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GrainGenes Marker Report: Hor1

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Locus	Hor1
Type	Gene RFLP
Synonym	Synonym Hor1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HS
Map	[ Hide all but 1 of 27 ] Barley-Consensus-1H -24.2 Barley-consensus-2003-1H 5.6 Barley-Consensus2-1H 35 Hordeum-Bins-1H 23.1 Hordeum-Consensus2005-SNP-1H 26.799 Hordeum-Consensus2006-DArT-1H 22.7 Hordeum-CxH-1H 0 Hordeum-CxS-1H 17.14 Hordeum-Genes-1H 56.3 Hordeum-Giese1-1H 22 Hordeum-Giese2-1H 18 Hordeum-Graner2-1H 8.8 Hordeum-GxH-1H 17.91 Hordeum-IxT/Q-1H -36.9 Hordeum-KxM-1H 46.9 Hordeum-NABGMP1-1H 15.3 Hordeum-Physical-RFLP-1H 16.8 Hordeum-QTLConsensus-Abiotic-1H 26.8 Hordeum-QTLConsensus-Agronomic-1H 26.8 Hordeum-StMo-SNP-1H 32.87 Hordeum-SxM-base-1H 15.7 Hordeum-SxM-FeedQTL-1H 15.3 Hordeum-SxM-SSAP-1H 14.3 Hordeum-Wise-1H 0 Hv-Consensus2006-Marcel-1H 22.41 Hv-Integrated2009-1H 23.8 Hv-Nure/Tremois-1H 9.2
	[ Show Nearby Loci ]
QTL with Locus Marker	QDp.BlE2-1H [ Show all 7 ]
Map Data	Barley consensus [ Show all 27 ]
2 Point Data	Hor1/Glu.c1 Distance: 22 cM Mla6/Hor1 Distance: 5 cM
Probe	Hor 1&2 Hor1 pc P387
Associated Gene	Hor1 (Hordeum)
Candidate Gene	Hor1 (Hordeum)
Gene Class	C-Hordein Hordeins
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Data Source	Blake, Tom 05.04.19 Langridge, Peter J.
Remark	Number of populations contributing to the placement of Hor1 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka,Nure x Tremois Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	HOR-1
Probe for Locus	Hor 1&2
Locus	Hor1
General Remarks	C hordein cDNA
Type	cDNA
Linkage Group	5S
Source Species	Hordeum vulgare
Insert Size	0.5