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GrainGenes Marker Report: HVCMA

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Locus
HVCMA
Type
Gene
Microsatellite
Synonym
SynonymHVCMA
POPA1_0721
Chromosome
1 (7H)
7H
Map
[ Hide all but 1 of 17 ]
Barley-consensus-2003-7H74
Barley-ConsensusFHB-7H69.45
Hordeum-Consensus2005-SNP-7H87.57
Hordeum-Consensus2007-SSR-7H67.59
Hordeum-LiHs-SNP-7H91.26
Hordeum-Lx41-7H39.3
Hordeum-LxHs-7H85
Hordeum-OWB-7H44.3
Hordeum-OWB-SNP-7H56.09
Hordeum-Pillen-7H86
Hordeum-QTLConsensus-Abiotic-7H87.57
Hordeum-QTLConsensus-Agronomic-7H87.57
Hordeum-TxE-7H90.8
Hv-Consensus2006-Marcel-7H67.59
Hv-HNxH602-7H118.1
Hv-Integrated2009-7H68.5
Hv-Vada/SusPtrit-7H71.28
[ Show Nearby Loci ]
Map Data
Barley consensus 2003
[ Show all 17 ]
Species
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
HVCMA
HVCMA-187
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceBecker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Data Source
Langridge, Peter J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
[ Show all 7 ]
Probe for Locus
HVCMA-187
Locus
HVCMA
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceBecker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Type
SSR
PCR primers
GCCTCGGTTTGGACATATAAAG
GTAAAGCAAATGTTGAGCAACG