Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Glb1

[Submit comment/correction]

Locus	Glb1
Type	Gene RFLP
Synonym	Synonym Glb1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 19 ] Barley-Consensus-1H 19.9 Barley-Consensus2-1H 80.5 Barley-ConsensusFHB-1H 70 Hordeum-Bins-1H 79.2 Hordeum-Consensus2005-SNP-1H 75.612 Hordeum-Consensus2006-DArT-1H 68.6 Hordeum-Consensus2007-SSR-1H 68.07 Hordeum-Genes-1H 9.7 Hordeum-NABGMP1-1H 72.4 Hordeum-OPA-2009-1H 90.92 Hordeum-PilotOPA1-1H 68.662 Hordeum-QTLConsensus-Abiotic-1H 75.61 Hordeum-QTLConsensus-Agronomic-1H 75.61 Hordeum-StMo-SNP-1H 82.75 Hordeum-SxM-base-1H 72.2 Hordeum-SxM-FeedQTL-1H 72.4 Hordeum-SxM-SSAP-1H 66.2 Hv-Consensus2006-Marcel-1H 68.07 Hv-Integrated2009-1H 68.1
	[ Show Nearby Loci ]
QTL with Locus Marker	QBgn.StMo-1H QBgsg.StMo-1H QBgsg.StMo-1H.1
Map Data	Barley consensus [ Show all 19 ]
Species	Hordeum vulgare
Probe	pHGHN29A
Associated Gene	Glb1 (Hordeum)
Candidate Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Glb1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	XGlb1
Probe for Locus	pHGHN29A
Locus	Glb1 Glb1-1H
Reference	Litts JC et al. (1990) The isolation and characterization of a barley 1 3-1 4-beta glucanase gene European Journal of Biochemistry 194:831-838.
General Remarks	(1-3;1-4) Beta-glucanase
Linkage Group	Barley 5 (1H)
Source Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Source Species	Hordeum vulgare
Insert Size	1.1