Query (optional)   in Class  

GrainGenes Marker Report: CFD15

[Submit comment/correction]

Probe
CFD15
Locus
[ Hide all but 1 of 11 ]
Xcfd15-1A
Xcfd15-1D
Xcfd15
Sr33
cfd15
cfd15(2)
Xcfd15-1B
cfd15-1A.1
cfd15-1A.2
cfd15-1D
cfd15-1A
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
Remarks
Quality Score = B
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (CT)20(TGTA)3
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' CTCCCGTATTGAGCAGGAAG 3'
Reverse 5' GGCAGGTGTGGTGATGATCT 3'
SSR size
179
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
1A/1D
Source Species
Aegilops tauschii