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GrainGenes Marker Report: Bmac0047c

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Locus
Bmac0047c
Type
Microsatellite
Synonym
SynonymBmac47
Chromosome
7H
Map
[ Hide all but 1 of 8 ]
Barley-ConsensusFHB-7H77.8
Hordeum-Consensus2005-SNP-7H73.776
Hordeum-Consensus2007-SSR-7H81.78
Hordeum-LiHs-SNP-7H102.93
Hordeum-LxHs-7H90
Hordeum-QTLConsensus-Abiotic-7H73.78
Hordeum-QTLConsensus-Agronomic-7H73.78
Hv-Integrated2009-7H79.5
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
Bmac0047
Bmac47
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (AC)16
Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
Bmac0047
[ Show all 8 ]
Probe for Locus
Bmac0047
Locus
Bmac0047
[ Show all 6 ]
Synonym
Other nameBmac47
Reference
ReferenceHearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Type
SSR
PCR primers
AACACACGTACACAAATACACA
ACGTCCATCACTTTGACC