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GrainGenes Marker Report: BCD907

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Locus
bcd907
Type
RFLP
Synonym
Synonymbcd907
Chromosome
3H
Map
Hordeum-Bins-3H2
[ Show all 16 ]
[ Show Nearby Loci ]
Map Data
3B Physical
[ Show all 16 ]
Species
Hordeum vulgare
Probe
BCD907
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Kleinhofs, Andris
Remark
[ Hide all but 1 of 8 ]
Number of populations contributing to the placement of BCD907 in the Barley, Consensus 2006 DArT maps = 1
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Marker placement value = 0.00 cM on map Oat-KxO/2003-3+38
Marker is a framework marker on map Oat-KxO/2003-3+38
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
BCD907-3H
[ Show all 15 ]



Probe
BCD907
Locus
bcd907
[ Show all 20 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Type
cDNA
Polymorphism
BCD907 EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
1.1