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GrainGenes Marker Report: BCD265c

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Locus	BCD265c
Type	RFLP
Synonym	Synonym BCD265
Chromosome	1H 5H
Map	Barley-ConsensusFHB-1H 119 [ Show all 8 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QHd.DiMo-1H.2
Map Data	Barley, Abiotic QTL Consensus [ Show all 8 ]
Probe	BCD265
Homology	T16307 e-value: 9e-06 hypothetical protein F40F4.5 - Caenorhabditis elegans TBA_WHEAT e-value: 5e-21 TUBULIN ALPHA CHAIN
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark	Number of populations contributing to the placement of BCD265c in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs	[ Hide all but 1 of 21 ] BCD265 BCD265(A) BCD265(B) BCD265(C) BCD265a BCD265B BCD265D Xbcd265 Xbcd265-1 Xbcd265-1A Xbcd265-1B Xbcd265-4A Xbcd265-4D Xbcd265.1 Xbcd265.2 Xbcd265A Xbcd265b Xcnl.BCD265 bcd265 bcd265-1A bcd265-4D
Probe for Locus	BCD265
Locus	Xbcd265-1 [ Show all 39 ]
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library Bar.LambZAPII [c]
Type	cDNA
Sequence	BE438696 [ Show all 6 ]
Polymorphism	BCD265 XbaI
Linkage Group	[b 5L]
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	1.8
PCR size	1.8