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GrainGenes Marker Report: ABG476

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Locus	ABG476
Type	RFLP STS
Synonym	Synonym ABG476
Chromosome	7H
Chromosome Arm	7HS
Map	Barley-consensus-2003-7H 80.9 [ Show all 17 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.DON_7H_4 [ Show all 6 ]
Map Data	[ Hide all but 1 of 19 ] Barley consensus Barley consensus 2 Barley consensus 2003 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, CxH Barley, FxS, FHB QTL Barley, Igri x Franka, SSR Barley, Integrated, Marcel 2009 Barley, IxF Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Probe	ABG476
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027. Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source	Langridge, Peter J.
Remark	Number of populations contributing to the placement of ABG476 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	ABG476-7H Xabg476.1 Xabg476.2
Probe	ABG476
Locus	ABG476 Xabg476.2 Xabg476.1 ABG476-7H
Synonym	Synonym HAR35_19762
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
STS primers	5' CACATGCAAATGCAGTGGG 5' TGGTTCAGAGTCCGGTTCC
STS size	ca. 900
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	BH854362 BH854361 ABG476-5 ABG476-3
Linkage Group	Group 1
Source Species	Hordeum vulgare
Insert Size	1