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GrainGenes Marker Report: ABG460

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Locus	ABG460
Type	RFLP
Synonym	Synonym ABG460
Chromosome	3H 5H
Chromosome Arm	3HS
Map	Barley-consensus-2003-5H 93.1 [ Show all 20 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 20 ]
Species	Hordeum vulgare
Probe	ABG460
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Choi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source	Blake, Tom 05.04.19 Langridge, Peter J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka
Possible Orthologs	[ Hide all but 1 of 8 ] ABG460-3H Xabg460 Xabg460-3 Xabg460-3A Xabg460-4A.1 Xabg460-4A.2 abg460 abg460-3A
Probe	ABG460
Locus	Xabg460-3 [ Show all 9 ]
Synonym	Synonym HAR35_23373 HAR35_30482
External Databases	DDBJ EMBL GenBank
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	TTG TGT GGT AAA AGT AAA AT TGG AGG AGA GCG GAA GAG AT
STS primers	5' CAGCGATTACAAGCGTGTAA 5' GGGACGTTCAAATTAACTTG
STS size	380
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	L44023 ABG460 ABG460-5 ABG460-3
Polymorphism	ABG460 EcoRV
Linkage Group	3S
Source Species	Hordeum vulgare
Insert Size	1.6