Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: ABG395

[Submit comment/correction]

Locus	ABG395
Type	RFLP
Synonym	Synonym ABG395
Chromosome	5H
Chromosome Arm	5HS
Map	[ Hide all but 1 of 24 ] Barley-Consensus-5H -9.2 Barley-Consensus2-5H 49.8 Barley-ConsensusFHB-5H 52.83 Hordeum-Bins-5H 46.2 Hordeum-Consensus2005-SNP-5H 43.95 Hordeum-Consensus2006-DArT-5H 40.3 Hordeum-Consensus2007-SSR-5H 38.72 Hordeum-KxM-5H 51 Hordeum-NABGMP1-5H 45.6 Hordeum-OPA-2009-5H 63.87 Hordeum-OWB-2004-5H 30.9 Hordeum-OWB-2005-5H 37 Hordeum-OWB-5H 29 Hordeum-OWB-OPA2008-5H 49.269 Hordeum-OWB-SNP-5H 16.89 Hordeum-PilotOPA1-5H 37.5 Hordeum-QTLConsensus-Abiotic-5H 43.95 Hordeum-QTLConsensus-Agronomic-5H 43.95 Hordeum-StMo-SNP-5H 42.32 Hordeum-SxM-base-5H 46.7 Hordeum-SxM-FeedQTL-5H 45.6 Hordeum-SxM-SSAP-5H 47.6 Hv-Consensus2006-Marcel-5H 38.72 Hv-Integrated2009-5H 40.7
	[ Show Nearby Loci ]
QTL with Locus Marker	QNb.StMo-5H
Map Data	Barley consensus [ Show all 24 ]
Species	Hordeum vulgare
Probe	ABG395
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABG395 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABG395-5H Xabg395
Probe	ABG395
Locus	ABG395 Xabg395 ABG395-5H
External Databases	DDBJ EMBL GenBank
Type	Genomic STS
PCR primers	TTAGGAAAGCGATGGACACA TTACAGGGCCAGGGTTACTG
Sequence	L43991 ABG395
Source Species	Hordeum vulgare