Query (optional)   in Class  

GrainGenes Marker Report: ABG373

[Submit comment/correction]

Locus
ABG373
Type
RFLP
Synonym
SynonymABG373
Chromosome
1H
Chromosome Arm
1HL
Map
Barley-Consensus-1H106.4
[ Show all 18 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QAa.StMo-1H
QMe.StMo-1H.5
Map Data
Barley consensus
[ Show all 20 ]
Probe
ABG373
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABG373 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
[ Hide all but 1 of 8 ]
abg373.2
Xabg373
Xabg373-1A
Xabg373-1B
Xabg373.1
abg373
abg373-1A
abg373-1B



Probe
ABG373
Locus
ABG373
[ Show all 12 ]
Synonym
SynonymHAR35_1948
External Databases
DDBJ
EMBL
GenBank
Remarks
Shin Ebisu16 gDNA
Type
Genomic
STS
PCR primers
CGG CAA AGG ACA CGG AGG AC
AGC AAC AAC GGC CAG AAG AG
Sequence
AF309357
L43983
ABG373
Polymorphism
ABG373 EcoRI
ABG373 HindIII
Linkage Group
Group 5
Source Species
Hordeum vulgare
Insert Size
0.6