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GrainGenes Marker Report: ABG366

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Locus
ABG366
Type
RFLP
STS
Synonym
SynonymABG366
Chromosome
4H
Chromosome Arm
4HL
Map
Barley-Consensus-4H51
[ Show all 20 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QKp.HaTR-4H.2
Map Data
Barley consensus
[ Show all 20 ]
Species
Hordeum vulgare
Probe
ABG366
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceChoi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of ABG366 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xabg366
[ Show all 6 ]



Probe
ABG366
Locus
[ Hide all but 1 of 7 ]
ABG366
Xabg366-5A
Xabg366-4A
Xabg366
abg366
Xsts-abg366
abg366-5A
External Databases
DDBJ
EMBL
GenBank
Remarks
Shin Ebisu16 gDNA
Type
Genomic
STS
PCR primers
CGC ACC CGC AGC CAC AGA GG
AAC CCC GAC AAG CCA AGA GC
Sequence
L43982
ABG366
ABG366-5
ABG366-3
Polymorphism
ABG366 DraI
Linkage Group
Group 4
Source Species
Hordeum vulgare
Insert Size
1