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GrainGenes Marker Report: ABC310b

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Locus	ABC310b
Type	RFLP SNP
Synonym	Synonym ABC310
Chromosome	5H 7H
Chromosome Arm	7HL
Map	Barley-consensus-2003-5H 79.5 [ Show all 26 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 26 ] Barley consensus 2 Barley consensus 2003 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, Cali-sib x BowmanBC, QTL Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, HxM/QTL Barley, HxT Barley, HxT basemap Barley, Integrated, Marcel 2009 Barley, IxF Barley, OPA 2009, Consensus Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs Barley, Zhedar2, FHB QTL
Species	Hordeum vulgare
Probe	ABC310
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J. Langridge, Peter J.
Remark	Number of populations contributing to the placement of ABC310B in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC310 [ Show all 16 ]
Probe for Locus	ABC310
Locus	ABC310 [ Show all 19 ]
General Remarks	Steptoe malt cDNA
Type	cDNA STS
PCR primers	TCC TGA TGG TCC TCT TAT GC ACA TAG TTC TCT TCC CAG TA
STS primers	5' CTTCCCTCTCCTTCAAAGGCC 5' CCCGGTTCAAAAAAGAAGAT
STS size	ca. 1500
Amplification Conditions	STS annealing temperature 55-58 oC
Sequence	BQ548064 BQ548065 ABC310 ABC310-5 ABC310-3
Linkage Group	Groups 7 &1
Source Species	Hordeum vulgare
Insert Size	1.6